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Suggested Readings
 
 
A compilation and categorization of alternative splicing resources

GeneBuilder

Tool nameGeneBuilder
URLhttp://zeus2.itb.cnr.it/~webgene/genebuilder.html
Important features1) Predicts TATA box(i.e, TATA box pattern and position) and Poly-A site prediction(i.e, position and pattern). 2) Gives view of transcription factors.
Citations Milanesi L, D'Angelo D, Rogozin IB. GeneBuilder: interactive in silico prediction of gene structure. Bioinformatics. 1999 Jul-Aug;15(7-8):612-21. PubMed PMID: 10487869.
Year of publication1999
Rank by usage frequency100
CommentsGene model and Coding potential are shown graphically, but are not loading as on 25th july 2012
FunctionSpecies, Finds alternative splicing in human, Finds alternative splicing in mouse, Finds alternative splicing in Arabidopsis, Finds alternative splicing in Drosophila, Finds alternative splicing in other species
Category
Input file formatDNA or Protein Sequence to be pasted
Output file format
LimitationSequence cannot be longer than 50,000 bp

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